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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1123337 chr11:128295431 A/G LOC100130331 chr1:238025475-238091617:+ 0.36 5.99 4.95E-9 Box Plot
BLCA rs1123337 chr11:128295431 A/G RPL19P12 chr7:102781796-102782386:- 0.38 6.53 2.1E-10 Box Plot
BLCA rs112337042 chr11:77652420 C/T INTS4L1 chr7:64601603-64694600:+ 0.5 6.88 2.45E-11 Box Plot
BLCA rs11237326 chr11:77648682 C/T INTS4L1 chr7:64601603-64694600:+ 0.49 6.84 3.23E-11 Box Plot
BLCA rs11237328 chr11:77655620 G/A INTS4L1 chr7:64601603-64694600:+ 0.5 6.88 2.45E-11 Box Plot
BLCA rs11237329 chr11:77655858 G/A INTS4L1 chr7:64601603-64694600:+ 0.5 6.88 2.45E-11 Box Plot
BLCA rs11237333 chr11:77665339 A/T INTS4L1 chr7:64601603-64694600:+ 0.5 7.06 7.87E-12 Box Plot
BLCA rs11237335 chr11:77668074 G/T INTS4L1 chr7:64601603-64694600:+ 0.5 6.96 1.49E-11 Box Plot
BLCA rs11237338 chr11:77678541 C/T INTS4L1 chr7:64601603-64694600:+ 0.49 6.88 2.47E-11 Box Plot
BLCA rs11237341 chr11:77687737 G/A INTS4L1 chr7:64601603-64694600:+ 0.49 6.88 2.47E-11 Box Plot
BLCA rs11237347 chr11:77703318 C/T INTS4L1 chr7:64601603-64694600:+ 0.49 6.75 5.34E-11 Box Plot
BLCA rs112458643 chr15:91519649 T/C LEPR chr1:65886335-66107242:+ 0.71 6.1 2.63E-9 Box Plot
BLCA rs112470997 chr5:99621799 C/A CT47A9 chrX:120077415-120080737:- 0.23 7.03 9.63E-12 Box Plot
BLCA rs11249349 chr1:121179169 G/C NBPF14 chr1:148003642-148025863:- 0.28 6.14 2.01E-9 Box Plot
BLCA rs11249350 chr1:121178446 C/T NBPF14 chr1:148003642-148025863:- 0.28 6.19 1.51E-9 Box Plot